Výpočetní cluster a úložiště Botanického ústavu & MetaCentra

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en:hw:vypocetni [2020/06/11 10:39]
Vojtěch Zeisek created
en:hw:vypocetni [2020/08/14 13:56]
Vojtěch Zeisek
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-====== Hardware overview ======+====== Computational nodes ======
  
   * [[en:hw|Hardware overview]]   * [[en:hw|Hardware overview]]
   * [[en:bu-metacentrum-vyuziti|The Institute of Botany & MetaCentrum, usage of the computing resources]]   * [[en:bu-metacentrum-vyuziti|The Institute of Botany & MetaCentrum, usage of the computing resources]]
     * [[en:prace|Work on the cluster]]     * [[en:prace|Work on the cluster]]
-    * [[en:pristup|Access to the computing cluster of IBOT for employees and collaborators]] and [[en:pristup#prihlaseni_do_infrastruktury_metacentra|login into MetaCentrum infrastructure]]+    * [[en:pristup|Access to the computing cluster of IBOT for employees and collaborators]] and [[en:pristup#login-into-metacentrum-infrastructure|login into MetaCentrum infrastructure]]
  
 ===== High-Performance computing (HPC) nodes ===== ===== High-Performance computing (HPC) nodes =====
  
-These three [[https://metavo.metacentrum.cz/pbsmon2/hardware#draba.ibot.cas.cz|nodes]] (''draba1'', ''draba2'' and ''draba3'') are primarily intended for running computations requiring massive parallelization and plenty of memory such as Apache [[https://hadoop.apache.org/|Hadoop]] and [[https://spark.apache.org/|Spark]]. Each node is equipped with 4 CPU Intel Xeon Gold 6230 (4x 20 cores (4x 40 threads), 2.1 GHz, turbo 3.9 GHz), 1536 GB RAM and 3x 1920 GB NVMe disk (RAID 0). If you are interested in using Apache Spark please contact [[https://www.ibot.cas.cz/en/people/person-detail/?it=803|Yann Bertrand]].+These three [[https://metavo.metacentrum.cz/pbsmon2/hardware#draba.ibot.cas.cz|nodes]] **draba** (''draba1'', ''draba2'' and ''draba3'') are primarily intended for running computations requiring massive parallelization and plenty of memory such as Apache [[https://hadoop.apache.org/|Hadoop]] and [[https://spark.apache.org/|Spark]]. Each node is equipped with 4 CPU Intel Xeon Gold 6230 (4x 20 cores (4x 40 threads), 2.1 GHz, turbo 3.9 GHz), 1536 GB RAM and 3x 1920 GB NVMe disk (RAID 0). If you are interested in using Apache Spark please contact [[https://www.ibot.cas.cz/en/people/person-detail/?it=803|Yann JK Bertrand]].
  
 {{:cluster_hpc_draba_1.jpg?200 |HPC nodes, cluster draba}} {{:cluster_hpc_draba_1.jpg?200 |HPC nodes, cluster draba}}
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 ===== Standard computational nodes ===== ===== Standard computational nodes =====
  
-Each of the six [[https://metavo.metacentrum.cz/pbsmon2/hardware#carex.ibot.cas.cz|nodes]] (''carex1'' to ''carex6'') is equipped with 1 CPU AMD EPYC Naples 7261 (8 cores (16 threads), 2.5 GHz, turbo 2.9 GHz), 512 GB RAM and 3x 1920 GB NVMe disk (RAID 0). They are intended for general purpose computation.+Each of the six [[https://metavo.metacentrum.cz/pbsmon2/hardware#carex.ibot.cas.cz|nodes]] **carex** (''carex1'' to ''carex6'') is equipped with 1 CPU AMD EPYC Naples 7261 (8 cores (16 threads), 2.5 GHz, turbo 2.9 GHz), 512 GB RAM and 3x 1920 GB NVMe disk (RAID 0). They are intended for general purpose computation.
  
-Each of the four [[https://metavo.metacentrum.cz/pbsmon2/hardware#vinca.ibot.cas.cz|nodes]] (''vinca1'' to ''vinca4'') is equipped with 1 CPU AMD EPYC 7302P (16 cores (32 threads), 3.0 GHz, turbo 3.3 GHz), 512 GB RAM and 3x 1920 GB NVMe disk (RAID 0). They are intended for general purpose computation.+Each of the four [[https://metavo.metacentrum.cz/pbsmon2/hardware#vinca.ibot.cas.cz|nodes]] **vinca** (''vinca1'' to ''vinca4'') is equipped with 1 CPU AMD EPYC 7302P (16 cores (32 threads), 3.0 GHz, turbo 3.3 GHz), 512 GB RAM and 3x 1920 GB NVMe disk (RAID 0). They are intended for general purpose computation.
  
 {{:cluster_carex.jpg?200 |Nodes of cluster carex}} {{:cluster_carex.jpg?200 |Nodes of cluster carex}}
 {{ :cluster_vinca.jpg?200 |Nodes of cluster vinca}} {{ :cluster_vinca.jpg?200 |Nodes of cluster vinca}}
  
en/hw/vypocetni.txt · Last modified: 2021/03/17 16:51 by Vojtěch Zeisek